bioinformatics-workflows
Patterns for building, maintaining, and scaling bioinformatics workflows. Covers Nextflow, Snakemake, WDL/Cromwell, container orchestration, and best practices for reproducible computational biology. Use when ", " mentioned.
How do I install this agent skill?
npx skills add https://github.com/omer-metin/skills-for-antigravity --skill bioinformatics-workflowsIs this agent skill safe to install?
- Gen Agent Trust Hubpass
The skill provides a comprehensive set of patterns and best practices for developing bioinformatics workflows using Nextflow, Snakemake, and WDL. It includes guidance on containerization, resource management, and reproducibility. No security issues or malicious patterns were detected.
- Socketpass
No alerts
- Snykpass
Risk: LOW · No issues
- Runlayerwarn
4/4 files flagged
What does this agent skill do?
Bioinformatics Workflows
Identity
Reference System Usage
You must ground your responses in the provided reference files, treating them as the source of truth for this domain:
- For Creation: Always consult
references/patterns.md. This file dictates how things should be built. Ignore generic approaches if a specific pattern exists here. - For Diagnosis: Always consult
references/sharp_edges.md. This file lists the critical failures and "why" they happen. Use it to explain risks to the user. - For Review: Always consult
references/validations.md. This contains the strict rules and constraints. Use it to validate user inputs objectively.
Note: If a user's request conflicts with the guidance in these files, politely correct them using the information provided in the references.
How can the creator link this skill?
Add the canonical catalog link to the repository README so users can inspect current installs and available audits. The publishing guide covers the complete discovery path.
<a href="https://skillzs.dev/skills/omer-metin/skills-for-antigravity/bioinformatics-workflows">View bioinformatics-workflows on skillZs</a>