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chdb-datastore

Use when the user has tabular data (pandas DataFrame, parquet, csv, Arrow, json) and wants to filter, group, aggregate, join, or speed up slow pandas. Provides chDB DataStore — same pandas API, ClickHouse engine underneath. Also handles reading from S3, MySQL, PostgreSQL, MongoDB, ClickHouse Cloud, Iceberg, Delta Lake as DataFrames and joining across sources. TRIGGER when: user mentions DataFrame, parquet, csv, "fast pandas", "speed up pandas", or cross-source DataFrame joins; user imports `chdb.datastore` or `from datastore import DataStore`. SKIP this skill for raw SQL syntax (use chdb-sql instead), ClickHouse server administration, or non-Python DataStore API work.

How do I install this agent skill?

npx skills add https://github.com/clickhouse/agent-skills --skill chdb-datastore
view source ↗

Is this agent skill safe to install?

  • Gen Agent Trust Hubpass

    The chdb-datastore skill provides a high-performance, pandas-compatible data analysis interface backed by ClickHouse. It enables efficient querying and joining across multiple data sources including local files, S3, MySQL, and PostgreSQL. Analysis confirmed the skill is an authentic tool from a recognized vendor and contains no malicious code, obfuscation, or unauthorized data access patterns.

  • Socketpass

    No alerts

  • Snykfail

    Risk: HIGH · 2 issues

  • ZeroLeakspass

    Score: 93/100 · 2 sections analyzed

What does this agent skill do?

chdb DataStore — It's Just Faster Pandas

The Key Insight

# Change this:
import pandas as pd
# To this:
import chdb.datastore as pd
# Everything else stays the same.

DataStore is a lazy, ClickHouse-backed pandas replacement. Your existing pandas code works unchanged — but operations compile to optimized SQL and execute only when results are needed (e.g., print(), len(), iteration).

pip install chdb

Decision Tree: Pick the Right Approach

1. "I have a file/database and want to analyze it with pandas"
   → DataStore.from_file() / from_mysql() / from_s3() etc.
   → See references/connectors.md

2. "I need to join data from different sources"
   → Create DataStores from each source, use .join()
   → See examples/examples.md #3-5

3. "My pandas code is too slow"
   → import chdb.datastore as pd — change one line, keep the rest

4. "I need raw SQL queries"
   → Use the chdb-sql skill instead

Connect to Any Data Source — One Pattern

from datastore import DataStore

# Local file (auto-detects .parquet, .csv, .json, .arrow, .orc, .avro, .tsv, .xml)
ds = DataStore.from_file("sales.parquet")

# Database
ds = DataStore.from_mysql(host="db:3306", database="shop", table="orders", user="root", password="pass")

# Cloud storage
ds = DataStore.from_s3("s3://bucket/data.parquet", nosign=True)

# URI shorthand — auto-detects source type
ds = DataStore.uri("mysql://root:pass@db:3306/shop/orders")

All 16+ sources and URI schemes → connectors.md

After Connecting — Full Pandas API

result = ds[ds["age"] > 25]                                          # filter
result = ds[["name", "city"]]                                        # select columns
result = ds.sort_values("revenue", ascending=False)                  # sort
result = ds.groupby("dept")["salary"].mean()                         # groupby
result = ds.assign(margin=lambda x: x["profit"] / x["revenue"])     # computed column
ds["name"].str.upper()                                               # string accessor
ds["date"].dt.year                                                   # datetime accessor
result = ds1.join(ds2, on="id")                                      # join
result = ds.head(10)                                                 # preview
print(ds.to_sql())                                                   # see generated SQL

209 DataFrame methods supported. Full API → api-reference.md

Cross-Source Join — The Killer Feature

from datastore import DataStore

customers = DataStore.from_mysql(host="db:3306", database="crm", table="customers", user="root", password="pass")
orders = DataStore.from_file("orders.parquet")

result = (orders
    .join(customers, left_on="customer_id", right_on="id")
    .groupby("country")
    .agg({"amount": "sum", "rating": "mean"})
    .sort_values("sum", ascending=False))
print(result)

More join examples → examples.md

Writing Data

source = DataStore.from_mysql(host="db:3306", database="shop", table="orders", user="root", password="pass")
target = DataStore("file", path="summary.parquet", format="Parquet")

target.insert_into("category", "total", "count").select_from(
    source.groupby("category").select("category", "sum(amount) AS total", "count() AS count")
).execute()

Troubleshooting

ProblemFix
ImportError: No module named 'chdb'pip install chdb
ImportError: cannot import 'DataStore'Use from datastore import DataStore or from chdb.datastore import DataStore
Database connection timeoutInclude port in host: host="db:3306" not host="db"
Join returns empty resultCheck key types match (both int or both string); use .to_sql() to inspect
Unexpected resultsCall ds.to_sql() to see the generated SQL and debug
Environment checkRun python scripts/verify_install.py (from skill directory)

References

Note: This skill teaches how to use chdb DataStore. For raw SQL queries, use the chdb-sql skill. For contributing to chdb source code, see CLAUDE.md in the project root.

Add the canonical catalog link to the repository README so users can inspect current installs and available audits. The publishing guide covers the complete discovery path.

<a href="https://skillzs.dev/skills/clickhouse/agent-skills/chdb-datastore">View chdb-datastore on skillZs</a>